Information for 9-TCAGAGGCCT (Motif 13)

A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T
Reverse Opposite:
G T C A C T A G A C T G G A T C G T A C C A G T A G T C C G A T A T C G T G C A
p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.845
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif438.6
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets45.9 +/- 23.0bp
Average Position of motif in Background48.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.76
Offset:4
Orientation:forward strand
Alignment:TCAGAGGCCT--
----AGGCCTNG
 A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TCAGAGGCCT--
----AGGCCTAG
 A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGGCCT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAGGCCT
GGTTAGAGACCT
 A C G T A C G T A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAGGCCT
RGTTAGTGCCCY
 A C G T A C G T A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCAGAGGCCT
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGGCCT-
AGGTCANTGACCTN
 A C G T A C G T A C G T A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCAGAGGCCT
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TCAGAGGCCT
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGGCCT
ACWTCAAAGG---
 A C G T A C G T A C G T A C G T A T G C C G T A C T A G G T C A A C T G C T A G A G T C A G T C A C G T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T