Information for 7-ACAATGRKGC (Motif 10)

C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C G T C A G A C T G T A C C T G A A C G T A C G T A C T G A G C T
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.856
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif62.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets50.6 +/- 22.2bp
Average Position of motif in Background49.4 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGRKGC
GACAATGNN--
 A C G T C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----ACAATGRKGC
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----ACAATGRKGC--
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGRKGC
VRAACAATGG---
 A C G T A C G T A C G T C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGRKGC
RNAACAATGG---
 A C G T A C G T A C G T C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--ACAATGRKGC
RAACAATGGN--
 A C G T A C G T C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGRKGC
VRRACAAWGG---
 A C G T A C G T A C G T C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ACAATGRKGC
ACAAAG----
 C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ACAATGRKGC
GAACAATGG---
 A C G T A C G T C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGRKGC
AAAACAATGG---
 A C G T A C G T A C G T C T G A A G T C C G T A C G T A A G C T A C T G C T G A A C G T A C T G A G T C
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T