Information for 6-AVACTACATTTCC (Motif 5)

C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A C T G A C G T A A C G T C T A G A C G T C T G A C T A G A C G T A C T G A G C T
p-value:1e-18
log p-value:-4.359e+01
Information Content per bp:1.808
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.1 +/- 18.5bp
Average Position of motif in Background42.3 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.85
Offset:2
Orientation:forward strand
Alignment:AVACTACATTTCC-
--ACTACAATTCCC
 C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C A C G T
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AVACTACATTTCC--------
-RACTACAACTCCCAGVAKGC
 C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AVACTACATTTCC--------
-AACTACAATTCCCAGAATGC
 C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AVACTACATTTCC----
-------ATTTCCTGTN
 C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AVACTACATTTCC---
------NRYTTCCGGH
 C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AVACTACATTTCC---
------ATTTTCCATT
 C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AVACTACATTTCC----
-----NNAYTTCCTGHN
 C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AVACTACATTTCC-----
------CACTTCCYCTTT
 C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AVACTACATTTCC---
------CACTTCCTGT
 C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AVACTACATTTCC---
------CACTTCCTCT
 C T G A T A G C C G T A A G T C A G C T G T C A A G T C G T C A C G A T A G C T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T