Information for 5-AACAGCGCCMTCT (Motif 4)

T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T
Reverse Opposite:
C G T A A C T G C T G A A C T G A C T G A C T G T G A C C T A G A T G C A C G T A C T G A C G T A G C T
p-value:1e-22
log p-value:-5.076e+01
Information Content per bp:1.828
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.2 +/- 18.8bp
Average Position of motif in Background54.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AACAGCGCCMTCT--------
-ANAGTGCCACCTGGTGGCCA
 T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AACAGCGCCMTCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AACAGCGCCMTCT--------
--TAGCGCCCCCTGGTGGCCA
 T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AACAGCGCCMTCT---
------GCCATCTGTT
 T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGCCMTCT
TCNNTTTACAGCGNNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGCCMTCT
TCNNTTTACAGCGNNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AACAGCGCCMTCT
TCNCTTTACAGCGNNNT--
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AACAGCGCCMTCT
ADGGYAGYAGCATCT
 A C G T A C G T T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AACAGCGCCMTCT---
------ACCATCTGTT
 T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AACAGCGCCMTCT--
---GCNGCCATCTTG
 T C G A C G T A T A G C C G T A A T C G A G T C A C T G A G T C A G T C G T A C A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G