Information for 11-CAGGCAGAGTTGGGWG (Motif 21)

A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G
Reverse Opposite:
A G T C C G A T A G T C A G T C A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C C A G T A C T G
p-value:1e-8
log p-value:-1.880e+01
Information Content per bp:1.903
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.8 +/- 12.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CAGGCAGAGTTGGGWG-------
------GTATTGGGTGGGTAATT
 A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAGGCAGAGTTGGGWG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CAGGCAGAGTTGGGWG
GGGGCTYGKCTGGGA-
 A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCAGAGTTGGGWG---
YCAGGCWCAGTACCAGGCTC
 A C G T A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CAGGCAGAGTTGGGWG
CCTGCTGAGH------
 A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CAGGCAGAGTTGGGWG--
--NATNGGGNGGGGANAN
 A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G A C G T A C G T
A C G T A C G T C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CAGGCAGAGTTGGGWG--
--TGCGGAGTGGGACTGG
 A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CAGGCAGAGTTGGGWG
--GGCGGGGGCGGGGG
 A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:CAGGCAGAGTTGGGWG---
--------CTTGAGTGGCT
 A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.48
Offset:10
Orientation:reverse strand
Alignment:CAGGCAGAGTTGGGWG-----
----------TGGGTGTGGCN
 A G T C G C T A A C T G A C T G A G T C T C G A A C T G C G T A A C T G A C G T A C G T A C T G A C T G A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C