Information for 5-NGGTCACTGAAGTTCC (Motif 10)

A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C
Reverse Opposite:
C A T G A C T G T C G A C G T A G T A C A G C T A C G T A G T C C G T A A T C G A G C T A T C G C G T A A T G C G T A C G T A C
p-value:1e-12
log p-value:-2.786e+01
Information Content per bp:1.686
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif64.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets58.0 +/- 27.0bp
Average Position of motif in Background52.6 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:forward strand
Alignment:NGGTCACTGAAGTTCC
------GGGAATTTCC
 A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:NGGTCACTGAAGTTCC
------GGGAATTTCC
 A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:NGGTCACTGAAGTTCC
-------TGACGT---
 A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:4
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:NGGTCACTGAAGTTCC------
--------NNACTTCCTCTTNN
 A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A

ETV6/MA0645.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:NGGTCACTGAAGTTCC
----AGCGGAAGTG--
 A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C
A C G T A C G T A C G T A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:NGGTCACTGAAGTTCC-
--TTGAATGAAATTCGA
 A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C A C G T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0011.1_Ehf_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:NGGTCACTGAAGTTCC
AGGACCCGGAAGTAA-
 A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C
T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:NGGTCACTGAAGTTCC
GGGTTACTANAGGTCA
 A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

ETS(ETS)/Promoter/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:NGGTCACTGAAGTTCC
---AACCGGAAGT---
 A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C
A C G T A C G T A C G T T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:NGGTCACTGAAGTTCC
-------NGAAGC---
 A C T G C A T G T A C G G C A T A T G C T C G A A T G C G C A T A C T G G T C A T C G A A C T G A C G T A C G T A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T