Information for 8-AMCGGCGCCT (Motif 7)

C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T
Reverse Opposite:
G C T A A T C G A C T G G A T C A C T G G T A C A G T C A T C G A C G T A C G T
p-value:1e-9
log p-value:-2.183e+01
Information Content per bp:1.741
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif211.6
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets48.4 +/- 26.4bp
Average Position of motif in Background47.4 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AMCGGCGCCT
-AGCGCGCC-
 C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AMCGGCGCCT-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AMCGGCGCCT-----
CCTTCGGCGCCAAAAGG
 A C G T A C G T C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F3/MA0469.2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AMCGGCGCCT-----
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AMCGGCGCCT----
AAAATGGCGCCATTTT
 A C G T A C G T C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AMCGGCGCCT--
TTTGGCGCCAAA
 C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AMCGGCGCCT----
NNGGCGACACCTCNNN
 A C G T A C G T C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AMCGGCGCCT----
NNNGGGGCGCCCCCNN
 A C G T A C G T C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AMCGGCGCCT
--CGGAGC--
 C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AMCGGCGCCT
--TGACACCT
 C G T A T G C A T A G C A C T G C A T G G T A C C T A G A G T C A T G C C G A T
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T