Information for 5-GGTGGCAGCAAAG (Motif 3)

C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T A C G T A C T G A G T C A C G T A C T G A G T C A G T C G T C A A G T C A G T C
p-value:1e-13
log p-value:-3.213e+01
Information Content per bp:1.924
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 13.6bp
Average Position of motif in Background49.6 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTGGCAGCAAAG
TGAGTCAGCA---
 C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGTGGCAGCAAAG-
---GTCAGCANNTN
 C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCAGCAAAG
GGTTGGCAT-----
 A C G T C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTGGCAGCAAAG
VBTGWCAGCB---
 C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGCAGCAAAG
NGTAGGTTGGCATNNN--
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGTGGCAGCAAAG--
NCTANGTCAGCAAATTT
 A C G T A C G T C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGCAGCAAAG
TNNGGGCAG-----
 A C G T C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGTGGCAGCAAAG---
----ACATCAAAGGNA
 C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PAX5/MA0014.2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGTGGCAGCAAAG------
GAGGGCAGCCAAGCGTGAC
 C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGTGGCAGCAAAG-
--NGTCAGCANTTT
 C T A G A C T G A C G T A C T G A C T G A G T C C G T A A C T G A G T C C G T A C T G A C G T A A C T G A C G T
A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T