Information for 10-GCTGATCTGCAGA (Motif 4)

C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A
Reverse Opposite:
C G A T A T G C A C G T A C T G T A G C C G T A C T A G C G T A A C G T A T G C C G T A A C T G A G T C
p-value:1e-13
log p-value:-3.084e+01
Information Content per bp:1.829
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.8 +/- 21.7bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCTGATCTGCAGA
-CTCATTTGCATW
 C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

POU1F1/MA0784.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCTGATCTGCAGA--
-CTAATTTGCATATT
 C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T
A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCTGATCTGCAGA-
-TTCATTTGCATAT
 C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTGATCTGCAGA---
TNTAATTTGCATANNN
 C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTGATCTGCAGA---
TNTAATTTGCATACNA
 C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTGATCTGCAGA---
TNTAATTTGCATACNA
 C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCTGATCTGCAGA-
----ATTTGCATAT
 C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCTGATCTGCAGA-
----ATTTGCATAA
 C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTGATCTGCAGA
-BTVATTWGCATA
 C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCTGATCTGCAGA
AATTTGCTGAC-------
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A C G T A T C G C G T A C G A T A G T C A C G T A C T G A G T C C G T A A T C G C G T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T