Information for 4-GGGGGCAGTA (Motif 2)

A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A
Reverse Opposite:
A G C T T C G A A G T C A C G T A C T G G T A C A G T C G A T C A G T C T A G C
p-value:1e-32
log p-value:-7.525e+01
Information Content per bp:1.841
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.83%
Number of Background Sequences with motif262.6
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets48.9 +/- 21.6bp
Average Position of motif in Background50.4 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGTA
TNNGGGCAG--
 A C G T A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCAGTA--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGCAGTA
NGTGGGCAT--
 A C G T A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCAGTA
AGRGGTCA---
 A C G T A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCAGTA
ANTGCGGGGGCGGN-
 A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGGGGCAGTA---
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GGGGGCAGTA--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GGGGGCAGTA-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGGGGCAGTA
TGTCAGGGGGCG---
 A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCAGTA--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A C T G A C T G A G T C C G T A A C T G A G C T C T G A A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A