Information for 9-CTTGAGCTCA (Motif 16)

T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A
Reverse Opposite:
C A G T C T A G T G C A A C T G A T G C A C G T G T A C T G C A T G C A A C T G
p-value:1e-6
log p-value:-1.548e+01
Information Content per bp:1.712
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif200.7
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets63.6 +/- 21.8bp
Average Position of motif in Background48.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTTGAGCTCA
--TGACCTYA
 T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTTGAGCTCA---
-ATGACGTCAYYN
 T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A A C G T A C G T A C G T
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTTGAGCTCA---
-ATGACGTCATCN
 T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A A C G T A C G T A C G T
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTTGAGCTCA----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTGAGCTCA---
-RTGACGTCAYCN
 T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A A C G T A C G T A C G T
A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTTGAGCTCA
TGACCTTGACCT--
 A C G T A C G T A C G T A C G T T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTGAGCTCA
--TGACCYCT
 T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTGAGCTCA
-GTGACCTT-
 T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTGAGCTCA-
CNNTTGACCTTTG
 A C G T A C G T T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTGAGCTCA---
-ATGACGTCATCN
 T G A C A C G T A C G T A C T G T G C A T A C G T G A C A C G T A G T C G T C A A C G T A C G T A C G T
A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A