p-value: | 1e-8 |
log p-value: | -1.935e+01 |
Information Content per bp: | 1.924 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.48% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 55.2 +/- 26.0bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0051.1_Osr2_1/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCAGTAGCCAAGG ATGTACAGTAGCAAAG- |
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PB0050.1_Osr1_1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCAGTAGCCAAGG ATTTACAGTAGCAAAA- |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCAGTAGCCAAGG------ NNTNGNNGTAACCAAGNNNNAGN |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCAGTAGCCAAGG---- ---GTTGCCATGGNAAC |
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NFIX/MA0671.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCAGTAGCCAAGG ---CGTGCCAAG- |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCAGTAGCCAAGG-- ----AAGGCAAGTGT |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGTAGCCAAGG-- NNNGTAACTANGNNA |
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NFIC/MA0161.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GCAGTAGCCAAGG -----TGCCAA-- |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCAGTAGCCAAGG -CTGTTGCTAGGS |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCAGTAGCCAAGG- --ACTAGCCAATCA |
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