Information for 6-AAMCTGCAGK (Motif 10)

T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T
Reverse Opposite:
T G C A A T G C C G A T T A C G T A G C C T G A C A T G C A T G A G C T A G C T
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.582
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif319.3
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets42.1 +/- 27.9bp
Average Position of motif in Background50.0 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAMCTGCAGK------
NNNANTGCAGTGCNNTT
 A C G T T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAMCTGCAGK-
CCCCCTGCTGTG
 A C G T T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAMCTGCAGK--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAMCTGCAGK
SNGCACCTGCHS-
 A C G T A C G T A C G T T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAMCTGCAGK--
--CCTGCTGAGH
 T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAMCTGCAGK----
TNTCCTGCTGTGNNG
 A C G T T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAMCTGCAGK----
NNTCCTGCTGTGNNN
 A C G T T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAMCTGCAGK----
TCNCCTGCTGNGNNN
 A C G T T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAMCTGCAGK
-ANCAGCTG-
 T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAMCTGCAGK
NCACCTGTN--
 A C G T T C G A T C G A G T A C G T A C G A C T A T C G A T G C G C T A T A C G A C G T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T