Information for 9-ATGTCAAATARAAAAG (Motif 12)

C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G
Reverse Opposite:
G A T C C G A T A C G T A C G T A C G T A G C T A G C T T C G A C G A T C G A T A C G T A C T G C T G A T A G C C T G A A C G T
p-value:1e-9
log p-value:-2.149e+01
Information Content per bp:1.767
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.4 +/- 23.1bp
Average Position of motif in Background66.4 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGTCAAATARAAAAG-
-TGCCAAAATAAACANN
 C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGTCAAATARAAAAG
BAGTCATANTGAAAG-
 C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ATGTCAAATARAAAAG---
--GTTAAAAAAAAAAATTA
 C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G A C G T A C G T A C G T
A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATGTCAAATARAAAAG--
-GTTCAAAAAAAAAATTC
 C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G A C G T A C G T
A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCAAATARAAAAG-
WNAGTCADAVTGAAACTN
 A C G T C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATGTCAAATARAAAAG-
--AACAAACAACAAGAG
 C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G A C G T
A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ATGTCAAATARAAAAG---
-----AAATAAGAAAAAAC
 C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:ATGTCAAATARAAAAG
------NATGGAAAAN
 C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATGTCAAATARAAAAG
----CCAATAAAAA--
 C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G
A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATGTCAAATARAAAAG
----CCAATAAAAC--
 C G T A A G C T A T C G A G C T G T A C C G T A C G T A C G T A A C G T C T G A T C G A C G T A C G T A G T C A C G T A C T A G
A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T