Information for 6-TGGGAAATCCCCA (Motif 8)

A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A
Reverse Opposite:
G C A T T C A G C A T G C A T G C T A G T C G A A G C T A C G T A G C T A T G C G T A C G A T C T G C A
p-value:1e-15
log p-value:-3.466e+01
Information Content per bp:1.653
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.26%
Number of Background Sequences with motif196.7
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets56.7 +/- 24.1bp
Average Position of motif in Background50.7 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:TGGGAAATCCCCA
-GGGAAATCCCCN
 A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:TGGGAAATCCCCA
--GGAAATCCCC-
 A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:TGGGAAATCCCCA
--GGAAATTCCC-
 A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:TGGGAAATCCCCA
--GGAAANCCCC-
 A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TGGGAAATCCCCA
GGGGGAATCCCC-
 A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGGGAAATCCCCA
AGGGGAATCCCCT
 A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TGGGAAATCCCCA
--GGAAATTCCC-
 A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGGGAAATCCCCA
AGGGGAATCCCCT
 A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAATCCCCA
CSTGGGAAAD-----
 A C G T A C G T A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGGGAAATCCCCA-----
-AGGAGACCCCCAATTTG
 A C G T C T A G A C T G T A C G T C G A T G C A T C G A A G C T G A T C G T A C G T A C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G