Information for 12-CCTGGCCAARAGS (Motif 11)

A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G
Reverse Opposite:
A T G C A G T C A C G T A G C T A G C T A C G T A C T G A C T G T A G C A G T C C G T A A C T G A C T G
p-value:1e-12
log p-value:-2.915e+01
Information Content per bp:1.835
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 23.1bp
Average Position of motif in Background52.5 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTGGCCAARAGS--
-NTGCCCANNGGTNA
 A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G A C G T A C G T
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTGGCCAARAGS
WDNCTGGGCA-----
 A C G T A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCTGGCCAARAGS--------
--TGGCCACCAGGGGGCGCTA
 A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCTGGCCAARAGS
---TGCCAA----
 A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGGCCAARAGS
RYHYACCTGB--------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTGGCCAARAGS---------
--TGGCCACCAGGTGGCACTNT
 A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCTGGCCAARAGS
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTGGCCAARAGS
GCTGTCAA-----
 A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTGGCCAARAGS
-CGTGCCAAG---
 A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCTGGCCAARAGS
NNCACCTGNN-------
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G T A T C G A T C G A C G T A C T A G T A C G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T