Information for 9-CTTGTGGGCA (Motif 9)

A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A
Reverse Opposite:
A G C T A C T G A T G C A G T C A G T C C G T A G A T C G C T A C G T A A T C G
p-value:1e-13
log p-value:-3.042e+01
Information Content per bp:1.859
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif116.5
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets48.7 +/- 28.4bp
Average Position of motif in Background49.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTTGTGGGCA-
--TNNGGGCAG
 A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTTGTGGGCA--
--CSTGGGAAAD
 A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A A C G T A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTTGTGGGCA-
--NGTGGGCAT
 A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTTGTGGGCA-
CTTCTGGGAAA
 A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A A C G T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTTGTGGGCA--
RGSMTBCTGGGAAAT
 A C G T A C G T A C G T A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTGGGCA-----
NNNNTTGGGCACNNCN
 A C G T A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTGGGCA-
NNHTGTGGTTWN
 A C G T A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTGTGGGCA--
-TTCTTGGAAAN
 A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A A C G T A C G T
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTGTGGGCA-
TTTCCAGGAAA
 A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTTGTGGGCA----
TTTCCAGGAAATGG
 A T G C C G A T C G A T C T A G A C G T A C T G A C T G A T C G T G A C C T G A A C G T A C G T A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G