Information for 3-TCTCAGAATGAGGAAC (Motif 7)

A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C
Reverse Opposite:
A T C G A C G T A C G T G T A C A G T C A C G T A T G C C G T A A C G T A C G T G T A C C A G T A C T G C T G A A C T G T C G A
p-value:1e-14
log p-value:-3.432e+01
Information Content per bp:1.757
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.9 +/- 20.8bp
Average Position of motif in Background29.0 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCTCAGAATGAGGAAC
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCTCAGAATGAGGAAC
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TCTCAGAATGAGGAAC-
------NATGAGTCANN
 A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCTCAGAATGAGGAAC
----GAAATGACTCA-
 A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C
A C G T A C G T A C G T A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T

JUND/MA0491.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TCTCAGAATGAGGAAC-
------NATGAGTCACN
 A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTCAGAATGAGGAAC
GAGCACAGCAGGACA---
 A C G T A C G T A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTCAGAATGAGGAAC
DCTCAGCAGG------
 A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTCAGAATGAGGAAC
-CACAGCAGGGGG---
 A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

PB0142.1_Jundm2_2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTCAGAATGAGGAAC---
---ATTGATGAGTCACCAA
 A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCTCAGAATGAGGAAC-
AAACATAATGAGGTTGC
 A C G T A G T C A G C T T G A C G C T A A C T G C G T A C G T A C G A T A T C G C G T A A C T G C A T G T G C A C G T A T A G C A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C