Information for 3-BYTGTGGTTT (Motif 3)

A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T
Reverse Opposite:
G T C A C T G A G T C A A G T C G T A C T C G A G T A C G C T A C T G A T C G A
p-value:1e-26
log p-value:-6.150e+01
Information Content per bp:1.633
Number of Target Sequences with motif127.0
Percentage of Target Sequences with motif15.36%
Number of Background Sequences with motif2464.1
Percentage of Background Sequences with motif5.18%
Average Position of motif in Targets52.6 +/- 25.6bp
Average Position of motif in Background51.3 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:BYTGTGGTTT
NNTGTGGTTT
 A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:BYTGTGGTTT-
-CTGTGGTTTN
 A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-BYTGTGGTTT
GTCTGTGGTTT
 A C G T A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:forward strand
Alignment:BYTGTGGTTT
GCTGTGGTTT
 A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-BYTGTGGTTT-
NNHTGTGGTTWN
 A C G T A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:BYTGTGGTTT
TTTGCGGTTT
 A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:BYTGTGGTTT
-TTGCGGTTT
 A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:BYTGTGGTTT---
--TGTGGATTNNN
 A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:BYTGTGGTTT-------
--TNTGGTTTCGATACN
 A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-BYTGTGGTTT
TGCTGTGATTT
 A C G T A G C T G A C T C G A T C A T G A G C T C A T G T C A G A C G T G A C T C A G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T