Information for 14-GBTWCAGGTT (Motif 19)

A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T
Reverse Opposite:
C T G A C G T A G T A C A T G C A C G T C T A G G C T A C G T A T G C A A T G C
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.664
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.20%
Number of Background Sequences with motif872.4
Percentage of Background Sequences with motif1.83%
Average Position of motif in Targets48.1 +/- 22.8bp
Average Position of motif in Background49.0 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SNAI2/MA0745.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GBTWCAGGTT-
--AACAGGTGT
 A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T A C G T
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GBTWCAGGTT
--TGTCGGTT
 A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T
A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

TFCP2/MA0145.3/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GBTWCAGGTT-
-AAACCGGTTT
 A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T A C G T
A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GBTWCAGGTT--
GKVTCADRTTWC
 A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T A C G T A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GBTWCAGGTT-
ATGCAACAGGTGG
 A C G T A C G T A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GBTWCAGGTT---
GAGCAACAGGTGGTT
 A C G T A C G T A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GBTWCAGGTT---
---VCAGGTRDRY
 A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GBTWCAGGTT--
GKMTCADRTTWC
 A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T A C G T A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GBTWCAGGTT---
---GCACGTACCC
 A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GBTWCAGGTT
----CACGTG
 A T C G A C G T G C A T C G A T G A T C G T C A A T C G A C T G A C G T A G C T
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G