Information for 15-AAGTGTTTGCTGT (Motif 17)

T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T
Reverse Opposite:
C T G A G A T C C G T A C T A G G A T C C G T A G T C A C G T A A G T C C T G A A T G C A G C T A G C T
p-value:1e-9
log p-value:-2.272e+01
Information Content per bp:1.671
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif221.1
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets46.0 +/- 25.3bp
Average Position of motif in Background49.0 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTTTGCTGT
TTAAGTGCTT-----
 A C G T A C G T T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGTGTTTGCTGT
TTRAGTGSYK-----
 A C G T A C G T T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTTTGCTGT-
NNGCGTGTGTGCNGCN
 A C G T A C G T T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGTTTGCTGT
NTCAAGTGGN------
 A C G T A C G T A C G T T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTTTGCTGT
TTAAGTGGN------
 A C G T A C G T T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGTTTGCTGT
NTCAAGTGG-------
 A C G T A C G T A C G T T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAGTGTTTGCTGT
---TGTTTACTTT
 T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAGTGTTTGCTGT
---TGTTTACH--
 T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTTTGCTGT
TTAAGTGGT------
 A C G T A C G T T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAGTGTTTGCTGT
---TGTTTACTTT
 T C G A C T G A A T C G G A C T T A C G G A C T C A G T C G A T C A T G A G T C C G A T C T A G A G C T
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T