Information for 2-TGTGGTTTCN (Motif 3)

G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G
Reverse Opposite:
A T G C A C T G C G T A T C G A T C G A G A T C T A G C T C G A G T A C C G T A
p-value:1e-32
log p-value:-7.520e+01
Information Content per bp:1.625
Number of Target Sequences with motif139.0
Percentage of Target Sequences with motif17.31%
Number of Background Sequences with motif2576.6
Percentage of Background Sequences with motif5.42%
Average Position of motif in Targets49.0 +/- 22.8bp
Average Position of motif in Background51.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTCN
NNTGTGGTTT--
A C G T A C G T G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTCN
CTGTGGTTTN-
A C G T G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTTTCN
GTCTGTGGTTT--
A C G T A C G T A C G T G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTCN
GCTGTGGTTT--
A C G T A C G T G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTTTCN
NNHTGTGGTTWN-
A C G T A C G T A C G T G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTCN
TTTGCGGTTT--
A C G T A C G T G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTCN
TTGCGGTTT--
A C G T G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TGTGGTTTCN--
--TGGTTTCAGT
G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTTCN-----
TNTGGTTTCGATACN
G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G A C G T A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTTCN-
TGTGGATTNNN
G C A T C A T G A G C T A T C G C T A G A G C T A G C T G C A T T G A C T A C G A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A