Information for 8-GACACAACAAAACTCA (Motif 23)

A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C T G A C G T A G T C
p-value:1e-7
log p-value:-1.676e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 28.8bp
Average Position of motif in Background75.6 +/- 2.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GACACAACAAAACTCA
ATGTCACAACAACAC---
 A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GACACAACAAAACTCA
AACACCAAAACAAAGGA--
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACACAACAAAACTCA
ATATCAAAACAAAACA--
 A C G T A C G T A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GACACAACAAAACTCA
CAAACAACAACACCT-
 A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GACACAACAAAACTCA
-CAAAATCGAAACTAA
 A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
A C G T T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GACACAACAAAACTCA-
AATGCAATAAAATTTAT
 A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GACACAACAAAACTCA
AACCCAATAAAATTCG
 A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GACACAACAAAACTCA
ATTTACGACAAATAGC-
 A C G T A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GACACAACAAAACTCA
CTACCAATAAAATTCT
 A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GACACAACAAAACTCA
-----AACAAT-----
 A C T G C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T