Information for 16-CGCACKTTGCATT (Motif 20)

A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C C G T A C T G A G T A C A C T G A C G T A C T G G T A C T A C G
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.856
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.8 +/- 27.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCACKTTGCATT-
TACCCACAATGCATTG
 A C G T A C G T A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCACKTTGCATT---
AATCGCACTGCATTCCG
 A C G T A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCACKTTGCATT
-GCACGTACCC--
 A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCACKTTGCATT--
TGGACTTTGNNCTCN
 A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCACKTTGCATT---
TGGACTTTGNNCTNTG
 A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGCACKTTGCATT-
----ATTTGCATAA
 A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Hes2/MA0616.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGCACKTTGCATT-
-GCACGTGTCNNNN
 A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T A C G T
A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCACKTTGCATT
GTCACGTGGM---
 A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGCACKTTGCATT
-GCACGTAY----
 A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGCACKTTGCATT-
----ATTTGCATAT
 A G T C A C T G A G T C C G T A A G T C C A G T A G C T A C G T A C T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T