Information for 10-TTTTTARAAATGA (Motif 11)

C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A
Reverse Opposite:
G A C T G A T C G T C A A G C T A C G T C A G T G A T C G A C T G C T A C T G A C G T A G T C A C G T A
p-value:1e-12
log p-value:-2.887e+01
Information Content per bp:1.675
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.55%
Number of Background Sequences with motif302.4
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets50.5 +/- 26.3bp
Average Position of motif in Background50.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTTTARAAATGA
CCGTATTATAAACAA
 A C G T A C G T C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTTTTARAAATGA
AATATTAATAAAGA
 A C G T C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTARAAATGA
ANATTTTTGCAANTN-
 A C G T A C G T A C G T C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTTTTARAAATGA-
AATATGCAAATTAG
 C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTTTTARAAATGA----
-AGTTATTAATGAGGTC
 C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A A C G T A C G T A C G T A C G T
A C G T G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTTTTARAAATGA------
--NNTAAAAACGATGTTNT
 C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTTTTARAAATGA
--TTTGAAACCG-
 C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTTTTARAAATGA
-GTTGCGCAAT--
 C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTARAAATGA
TTTCTNAGAAAN--
 A C G T C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTTTTARAAATGA
NATTGTGCAAT--
 C G A T A C G T G C A T A G C T C G A T C T G A C T A G G T C A C G T A C T G A C A G T C T A G C T G A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T