Information for 6-TTAATTACAG (Motif 5)

G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G
Reverse Opposite:
G T A C C G A T A C T G A C G T G T C A G T C A A G C T C A G T T C G A C T G A
p-value:1e-13
log p-value:-3.223e+01
Information Content per bp:1.691
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.52%
Number of Background Sequences with motif453.3
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets47.4 +/- 31.6bp
Average Position of motif in Background48.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEOX2/MA0706.1/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TTAATTACAG
NTTAATTACN-
 A C G T G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T

VAX2/MA0723.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TTAATTACAG
CTAATTAC--
 G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G
A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C A C G T A C G T

VAX1/MA0722.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TTAATTACAG
CTAATTAC--
 G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G
A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:4
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TTAATTACAG
TTAATTAN--
 G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G
C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T A C G T

MNX1/MA0707.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTAATTACAG
TTTAATTANN-
 A C G T G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G
C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:6
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTAATTACAG
GNTAATTAGN-
 A C G T G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G
A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TTAATTACAG--
NNAATTAATGACCNNN
 A C G T A C G T A C G T A C G T G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

LMX1A/MA0702.1/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTAATTACAG
TTAATTAA--
 G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G
A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A A C G T A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:9
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----TTAATTACAG--
GAAAATTAATTACTTTG
 A C G T A C G T A C G T A C G T A C G T G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G A C G T A C G T
C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

PH0063.1_Hoxb8/Jaspar

Match Rank:10
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TTAATTACAG--
TTTATTAATTGCNNGN
 A C G T A C G T A C G T A C G T G A C T A G C T G T C A C T G A C A G T C A G T G T C A G T A C C G T A A C T G A C G T A C G T
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T