Information for 5-TAGGGCGCCA (Motif 4)

C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A
Reverse Opposite:
A C G T A T C G A T C G A T G C A C T G A G T C A G T C A G T C A C G T G T C A
p-value:1e-15
log p-value:-3.659e+01
Information Content per bp:1.853
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif50.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets37.6 +/- 21.2bp
Average Position of motif in Background40.2 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TAGGGCGCCA--
TTTGGCGCCAAA
 C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGCCA-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGCCA-----
CCTTCGGCGCCAAAAGG
 A C G T A C G T C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TAGGGCGCCA
-AGCGCGCC-
 C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TAGGGCGCCA----
TTGGGGGCGCCCCTAG
 A C G T A C G T C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

E2F3/MA0469.2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TAGGGCGCCA-----
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGCGCCA----
ANCGCGCGCCCTTNN
 A C G T C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGCGCCA----
NTCGCGCGCCTTNNN
 A C G T C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TAGGGCGCCA---
---GGCGGGAAAH
 C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TAGGGCGCCA--
--GGGCGGGACC
 C A G T T G C A A C T G C T A G A C T G A G T C A T C G A T G C A T G C C G T A A C G T A C G T
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C