Information for 7-AAAACATRTCACG (Motif 4)

C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G
Reverse Opposite:
G T A C C T A G A C G T A C T G C G T A A G C T C T G A A C G T A T C G A C G T A C G T A C G T A C G T
p-value:1e-11
log p-value:-2.543e+01
Information Content per bp:1.818
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.9 +/- 27.2bp
Average Position of motif in Background26.1 +/- 19.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAAACATRTCACG
GCAAAACATTACTA-
 A C G T A C G T C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AAAACATRTCACG
AACACCAAAACAAAGGA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAACATRTCACG--
AATTACCTGTCAATAC
 A C G T C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAAACATRTCACG
ATATCAAAACAAAACA--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AAAACATRTCACG-
------AGTCACGC
 C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAACATRTCACG--
AAAGACCTGTCAATAC
 A C G T C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAACATRTCACG--
AAAGACCTGTCAATCC
 A C G T C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAACATRTCACG--
AACGAGCTGTCAATAC
 A C G T C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAACATRTCACG--
AAGCACCTGTCAATAT
 A C G T C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAAACATRTCACG
---ARNTGACA--
 C G T A C G T A C G T A C G T A A T G C G T C A A G C T C T G A C G A T A G T C C G T A A G T C C A T G
A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T