Information for 6-GCAGCTCAAC (Motif 7)

A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T C G A T C T A G C G T A A C T G G T A C A C G T C T A G A G T C
p-value:1e-10
log p-value:-2.345e+01
Information Content per bp:1.892
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif45.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.4 +/- 27.6bp
Average Position of motif in Background51.2 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL2/MA0777.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTCAAC----
GACNGTTTAACGGTT
 A C G T A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTCAAC
ANCAGCTG---
 A C G T A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTCAAC
GACAGCTGCAG
 A C G T A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCAGCTCAAC
NAHCAGCTGD--
 A C G T A C G T A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTCAAC
AACAGCTG---
 A C G T A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTCAAC
CGCAGCTGCG-
 A C G T A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTCAAC
CAGCAGCTGN--
 A C G T A C G T A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTCAAC
AACAGCTGCAG
 A C G T A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAGCTCAAC
-CAGCC----
 A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCTCAAC-------
GAAGTANCACGAATNMRAGT
 A C G T A C G T A C G T A C T G A G T C C G T A A C T G G T A C A C G T G A T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T