Information for 12-GCGGHCAACT (Motif 15)

A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T
Reverse Opposite:
C G T A A T C G A G C T A C G T A C T G C G A T A G T C A G T C A C T G A G T C
p-value:1e-7
log p-value:-1.674e+01
Information Content per bp:1.897
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif39.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.1 +/- 22.6bp
Average Position of motif in Background49.5 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCGGHCAACT--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCGGHCAACT--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCGGHCAACT--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCGGHCAACT--
GCCGCCATCTTG
 A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGGHCAACT
AGRGGTCA---
 A C G T A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCGGHCAACT-------
-CNGACACCTGTTCNNN
 A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGGHCAACT
GGCGGGAAAH-
 A C G T A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGGHCAACT
GCTGTCAA--
 A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGGHCAACT
TRAGGTCA---
 A C G T A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGGHCAACT--
GCNGCCATCTTG
 A C T G A G T C A C T G A C T G G C A T A G T C C G T A C T G A A T G C A C G T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G