Information for 8-CMCCKAGCTG (Motif 9)

T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G
Reverse Opposite:
A T G C T C G A C A T G T G A C C A G T T G C A T C A G T C A G C A T G A T C G
p-value:1e-8
log p-value:-1.876e+01
Information Content per bp:1.570
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.27%
Number of Background Sequences with motif408.9
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets53.3 +/- 25.9bp
Average Position of motif in Background50.5 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CMCCKAGCTG--
------GCTGTG
 T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CMCCKAGCTG---
---CCAGCTGTTN
 T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CMCCKAGCTG-
-RYHYACCTGB
 T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G A C G T
A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CMCCKAGCTG---
---HCAGCTGDTN
 T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CMCCKAGCTG--
-NNGCAGCTGTC
 T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G A C G T A C G T
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CMCCKAGCTG
-CCTCACCTG
 T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CMCCKAGCTG---
GGCCYCCTGCTGDGH
 A C G T A C G T T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CMCCKAGCTG--
-NNGCAGCTGTT
 T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G A C G T A C G T
A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CMCCKAGCTG--
----CAGCTGTT
 T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CMCCKAGCTG--
CCCCCTGCTGTG
 T A G C G T A C A G T C A G T C A C G T G T C A A C T G G T A C A G C T T A C G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G