Information for 3-CMCCAGGGGCTGWRCT (Motif 3)

A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T
Reverse Opposite:
C T G A T A C G A G C T C G T A A G T C C G T A C A T G G A T C T A G C G T A C G T A C G C A T C A T G C T A G C A G T A T C G
p-value:1e-16
log p-value:-3.771e+01
Information Content per bp:1.592
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.57%
Number of Background Sequences with motif575.7
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets49.2 +/- 26.2bp
Average Position of motif in Background51.1 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CMCCAGGGGCTGWRCT
TCCCCTGGGGAC-----
 A C G T A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CMCCAGGGGCTGWRCT
TCCCNNGGGACN-----
 A C G T A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CMCCAGGGGCTGWRCT
TGCCCTGAGGGCA-----
 A C G T A C G T A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CMCCAGGGGCTGWRCT
TGCCCNNAGGGCA-----
 A C G T A C G T A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CMCCAGGGGCTGWRCT
ATTCCCAAGGGAAT-----
 A C G T A C G T A C G T A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CMCCAGGGGCTGWRCT
TGCCCTNAGGGCA-----
 A C G T A C G T A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CMCCAGGGGCTGWRCT-
---AGGGGGCGGGGCTG
 A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T A C G T
A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CMCCAGGGGCTGWRCT
----GGGGGCGGGGCC
 A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T
A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CMCCAGGGGCTGWRCT
----TGGGGAAGGGCM
 A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CMCCAGGGGCTGWRCT
----GGGGGCGGGGC-
 A T G C G T C A A G T C G T A C C G T A C A T G C A T G A T C G C T A G G T A C C G A T A C T G G C A T T C A G A T G C A G C T
A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T