Information for 11-CWCTTGAGGT (Motif 14)

A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T
Reverse Opposite:
C T G A G T A C G T A C A C G T G A T C C G T A C G T A A T C G C G A T A C T G
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.750
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif130.2
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets42.7 +/- 24.0bp
Average Position of motif in Background53.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CWCTTGAGGT
ACCACTTGAA--
 A C G T A C G T A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CWCTTGAGGT
CCACTTGAA--
 A C G T A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CWCTTGAGGT
NSCACTYVAV--
 A C G T A C G T A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CWCTTGAGGT-
TAAGCCACTTGAATTT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CWCTTGAGGT--
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CWCTTGAGGT-
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CWCTTGAGGT
RSCACTYRAG--
 A C G T A C G T A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CWCTTGAGGT
NCACGTGACN-
 A C G T A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CWCTTGAGGT-
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

Nkx2-5/MA0063.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CWCTTGAGGT
CAATTAA---
 A G T C C G T A T A G C G C A T A C G T C T A G C G T A A C T G C A T G A G C T
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T