Information for 5-CTGGNAAGATGCCCCT (Motif 8)

A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T
Reverse Opposite:
G T C A C T A G A C T G A T C G T A C G A T G C G T C A G C A T A T G C A G C T C A G T A C T G G T A C G T A C C G T A A T C G
p-value:1e-10
log p-value:-2.334e+01
Information Content per bp:1.687
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.0 +/- 20.5bp
Average Position of motif in Background56.6 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGGNAAGATGCCCCT
CTGGCAGNCTGCCA--
 A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:CTGGNAAGATGCCCCT--
--------TTCCCCCTAC
 A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGGNAAGATGCCCCT
CTTGGCANNNTGCCAA-
 A C G T A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGGNAAGATGCCCCT
TTGGCATGGTGCCA--
 A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CTGGNAAGATGCCCCT--
--------AAGACCCYYN
 A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CTGGNAAGATGCCCCT----
----GGGTGTGCCCAAAAGG
 A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTGGNAAGATGCCCCT
-GGTCANNGTGACCTN
 A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CTGGNAAGATGCCCCT-
-------BNTGDCCTTG
 A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.49
Offset:8
Orientation:forward strand
Alignment:CTGGNAAGATGCCCCT-
--------ATGCCCACC
 A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CTGGNAAGATGCCCCT
CAKCTGKYCYYTTYCCC--
 A C G T A C G T A C G T A T G C C G A T A C T G A C T G A G T C G C T A C T G A A T C G C G T A C A G T T A C G A T G C A T G C A G T C A G T C A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C A C G T A C G T