Information for 5-TGCTATCTGG (Motif 3)

A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G
Reverse Opposite:
G T A C G T A C C G T A A C T G C G T A C G A T C T G A A T C G A T G C C G T A
p-value:1e-17
log p-value:-4.071e+01
Information Content per bp:1.845
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif139.2
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets58.7 +/- 24.7bp
Average Position of motif in Background53.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGCTATCTGG-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGCTATCTGG---
---GGTCTGGCAT
 A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGCTATCTGG---
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCTATCTGG-
-GCCATCTGTT
 A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCTATCTGG
YSTTATCT--
 A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGCTATCTGG
--CTGTCTGG
 A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

BCL6B/MA0731.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCTATCTGG-------
TGCTTTCTAGGAATTCA
 A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCTATCTGG----
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCTATCTGG---
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCTATCTGG
VBSYGTCTGG
 A C G T A T C G A T G C A G C T G C T A A C G T G T A C A C G T A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G