Information for 4-GAAATGGCACCACCTG (Motif 3)

T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G
Reverse Opposite:
A G T C C T G A C T A G T A C G C A G T C A T G A T C G G A C T T A C G A T G C G T A C C T G A A C G T A G C T A C G T A T G C
p-value:1e-32
log p-value:-7.555e+01
Information Content per bp:1.540
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif9.45%
Number of Background Sequences with motif831.4
Percentage of Background Sequences with motif1.74%
Average Position of motif in Targets51.4 +/- 23.7bp
Average Position of motif in Background50.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FIGLA/MA0820.1/Jaspar

Match Rank:1
Score:0.67
Offset:8
Orientation:forward strand
Alignment:GAAATGGCACCACCTG--
--------ACCACCTGTT
 T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:8
Orientation:forward strand
Alignment:GAAATGGCACCACCTG--
--------NNCACCTGNN
 T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.65
Offset:7
Orientation:forward strand
Alignment:GAAATGGCACCACCTG---
-------SNGCACCTGCHS
 T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.65
Offset:8
Orientation:forward strand
Alignment:GAAATGGCACCACCTG--
--------AACACCTGCT
 T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GAAATGGCACCACCTG---
---NNGGCGACACCTCNNN
 T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.63
Offset:9
Orientation:reverse strand
Alignment:GAAATGGCACCACCTG--
---------NCACCTGTN
 T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.63
Offset:8
Orientation:forward strand
Alignment:GAAATGGCACCACCTG--
--------CGCACCTGCT
 T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.62
Offset:8
Orientation:forward strand
Alignment:GAAATGGCACCACCTG--
--------TACACCTGTC
 T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAAATGGCACCACCTG-----
----NNTNCGCACCTGTNGAN
 T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:GAAATGGCACCACCTG----
--------NVCAGCTGBBNN
 T A C G T G C A C T G A T G C A G A C T C A T G T A C G A T G C C T G A T A G C G T A C G T C A A T G C G A T C G A C T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C