Information for 5-GAGGAATTTC (Motif 9)

A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C
Reverse Opposite:
T A C G G T C A G T C A C T G A C G A T A G C T T A G C A G T C A G C T A T G C
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.740
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif178.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets54.3 +/- 29.6bp
Average Position of motif in Background50.7 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAGGAATTTC-
-GGGAATTTCC
 A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C A C G T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GAGGAATTTC
NTGGAATGTN
 A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAGGAATTTC
CCWGGAATGY-
 A C G T A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGGAATTTC-
-GGGAATTTCC
 A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGGAATTTC
NCTGGAATGC-
 A C G T A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGGAATTTC
AGAGGAAGTG-
 A C G T A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGGAATTTC
AGAGGAA----
 A C G T A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGGAATTTC
NTGGAATGTG
 A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAGGAATTTC
TTAAGAGGAAGTTA
 A C G T A C G T A C G T A C G T A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAGGAATTTC
-TGGAATGT-
 A T C G C T G A A C T G A T C G T C G A C G T A A G C T A C G T A C G T A T G C
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T