Information for 10-ACAGCYAGAGGGY (Motif 8)

C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C
Reverse Opposite:
C T A G A G T C A G T C A G T C A G C T A G T C A C G T C T G A A C T G A G T C A C G T A C T G A G C T
p-value:1e-10
log p-value:-2.425e+01
Information Content per bp:1.918
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 20.8bp
Average Position of motif in Background53.5 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCYAGAGGGY
CACAGN--------
 A C G T C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAGCYAGAGGGY-------
GCCASCAGGGGGCGCYVNNG
 C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAGCYAGAGGGY--
-CCGCCCAAGGGCAG
 C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCYAGAGGGY
DCHCAGCAGGRGGCC
 A C G T A C G T C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACAGCYAGAGGGY
CACAGCAGGGGG--
 A C G T C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACAGCYAGAGGGY--
---GCCTCAGGGCAT
 C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACAGCYAGAGGGY----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACAGCYAGAGGGY
NAACAGCTGG-----
 A C G T A C G T C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACAGCYAGAGGGY-
--TGCCCNGGGGCA
 C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACAGCYAGAGGGY-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T C T G A A G T C C G T A A C T G A G T C A G C T C G T A A C T G C T G A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T