Information for 8-TGAAATATTT (Motif 8)

C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T
Reverse Opposite:
T C G A C T G A C T G A G C A T T C G A G A C T C G A T A C G T A G T C G T C A
p-value:1e-9
log p-value:-2.291e+01
Information Content per bp:1.596
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif7.13%
Number of Background Sequences with motif1345.2
Percentage of Background Sequences with motif2.83%
Average Position of motif in Targets47.3 +/- 28.8bp
Average Position of motif in Background49.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGAAATATTT
--AATTATT-
 C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGAAATATTT-
NNTNNCAATATTAG
 A C G T A C G T A C G T C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGAAATATTT-
NNTNNCAATATTAG
 A C G T A C G T A C G T C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGAAATATTT--
CCTTGCAATTTTTNN
 A C G T A C G T A C G T C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGAAATATTT--
TGAATTATGCAT
 C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T A C G T A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

POU4F1/MA0790.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGAAATATTT--
CATTAATTATTCAT
 A C G T A C G T C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T A C G T A C G T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGAAATATTT
ACTGAAACCA--
 A C G T A C G T C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGAAATATTT----
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGAAATATTT----
CTTTAAGTACTTAATG
 A C G T A C G T C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TGAAATATTT
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T C A G C T A C T G A A G C T C G T A G A C T G A C T A G C T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T