Information for 9-TTTGAAAATT (Motif 9)

A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T
Reverse Opposite:
C T G A G T C A C A G T C A G T A G C T C A G T T A G C G C T A G C T A C T G A
p-value:1e-6
log p-value:-1.600e+01
Information Content per bp:1.652
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif8.68%
Number of Background Sequences with motif2128.5
Percentage of Background Sequences with motif4.49%
Average Position of motif in Targets51.3 +/- 29.9bp
Average Position of motif in Background49.9 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTTGAAAATT
TTTGAAACCG
 A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAAATT
ATTTGAATT--
 A C G T A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAAATT-
TTATGCAAATTA
 A C G T A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAAATT-
TTATGCAAATTA
 A C G T A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTTGAAAATT
AATATGCAAATT
 A C G T A C G T A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAAATT
ATATGCAAAT-
 A C G T A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTGAAAATT---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

POU3F3/MA0788.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTGAAAATT-
ATTATGCTAATTT
 A C G T A C G T A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T A C G T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTGAAAATT---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTGAAAATT---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A G C T C G A T C G A T A T C G G T C A T C G A G T C A G T C A C A G T G A C T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A