Information for 8-TGGCABTADGCAA (Motif 6)

A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T A C T G A T G C G C T A A C G T C G T A T A C G A C G T A C T G A G T C A G T C C G T A
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.849
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.6 +/- 20.0bp
Average Position of motif in Background53.8 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGGCABTADGCAA-
TGGCACCATGCCAA
 A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGGCABTADGCAA-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TGGCABTADGCAA-
-----TTATGCAAT
 A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

POU2F1/MA0785.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGGCABTADGCAA---
----AATATGCAAATT
 A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGGCABTADGCAA-
----RTTATGYAAB
 A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGCABTADGCAA-
TGGCAGNCTGCCAG
 A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TGGCABTADGCAA--
-----ATATGCAAAT
 A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGGCABTADGCAA--
-----TTATGCAAAT
 A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGGCABTADGCAA-
---NATTGTGCAAT
 A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

CEBPG/MA0838.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGGCABTADGCAA-
----ATTGCGCAAT
 A C G T A C T G C T A G G T A C C G T A A G T C A C G T G T C A C A G T A T C G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T