Information for 6-TTGTCCTCTA (Motif 3)

A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A
Reverse Opposite:
G C A T C G T A C T A G G T C A A C T G C T A G C T G A A G T C G T C A G T C A
p-value:1e-18
log p-value:-4.176e+01
Information Content per bp:1.834
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif160.5
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets38.5 +/- 23.0bp
Average Position of motif in Background48.7 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCCTCTA------
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGTCCTCTA---
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGTCCTCTA
-TGACCTYA-
 A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTGTCCTCTA
-TGACCYCT-
 A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCTCTA
CCATTGTTTT---
 A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCTCTA
CCATTGTTNY---
 A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TTGTCCTCTA
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TTGTCCTCTA
ANNTCTATTGTTCNNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTGTCCTCTA
CNNTTGACCTTTG
 A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCTCTA
YCTTTGTTCC---
 A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C A G T C C A G T A G T C A C G T C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T