Information for 11-TTTTAAGAGG (Motif 16)

A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G
Reverse Opposite:
T A G C A G T C G C A T A G T C G C A T A C G T C T G A C T G A C G T A T G C A
p-value:1e-8
log p-value:-1.856e+01
Information Content per bp:1.656
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif8.29%
Number of Background Sequences with motif1892.9
Percentage of Background Sequences with motif3.97%
Average Position of motif in Targets50.7 +/- 29.1bp
Average Position of motif in Background50.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAAGAGG
NTTTTACGAGN
 A C G T A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAAGAGG---
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAAGAGG---
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTTTAAGAGG
TTTTATKRGG
 A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGAGG----
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAAGAGG
NTTTTACGAC-
 A C G T A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGAGG----
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTTAAGAGG
TTTTATTRGN
 A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAAGAGG----
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAAGAGG-----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T G C A T A G C T G A C T T G C A C G T A T C A G C G T A T C A G A T C G A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G