Information for 2-GGAGGTGGCGCCACCT (Motif 2)

A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T
Reverse Opposite:
G T C A C A T G A T C G C G A T A C T G A C T G A G T C A C T G A G T C A G T C G T C A A G T C A G T C C G A T A T G C T G A C
p-value:1e-18
log p-value:-4.230e+01
Information Content per bp:1.721
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif17.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.5 +/- 27.9bp
Average Position of motif in Background54.3 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGAGGTGGCGCCACCT-
-NNNGGGGCGCCCCCNN
 A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGAGGTGGCGCCACCT
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGAGGTGGCGCCACCT
GCGGAGGTGTCGCCTC--
 A C G T A C G T A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGAGGTGGCGCCACCT
---TTTGGCGCCAAA-
 A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T
A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGAGGTGGCGCCACCT
TGGCCACCAGGGGGCGCTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAGGTGGCGCCACCT-
NNNNTTGGCGCCGANNN
 A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGAGGTGGCGCCACCT-
-AAAATGGCGCCATTTT
 A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGAGGTGGCGCCACCT--
-CCTTCGGCGCCAAAAGG
 A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T A C G T A C G T
A C G T G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGGTGGCGCCACCT
NNNAAGGGGGCGGGNNN-
 A C G T A C G T A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T

E2F3/MA0469.2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAGGTGGCGCCACCT--
AAAAATGGCGCCATTTTT
 A C T G T A C G C G T A C T A G C T A G C A G T C T A G A C T G A G T C T C A G A G T C A G T C G C T A A T G C G A T C C A G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T