Information for 5-AAGASTGSAW (Motif 7)

C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T
Reverse Opposite:
C G T A A G C T T A G C A G T C C G T A A T C G G A C T G T A C A C G T C G A T
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.752
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif321.1
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets45.4 +/- 25.0bp
Average Position of motif in Background51.0 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAGASTGSAW--
GAAAAAATTGCAAGG
 A C G T A C G T A C G T C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

POL002.1_INR/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAGASTGSAW
NNNANTGA--
 C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGASTGSAW------
AACACTGCAATTGTTC
 C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGASTGSAW--
CTAATATTGCTAAA
 A C G T A C G T C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGASTGSAW--
CTAATATTGCTAAA
 A C G T A C G T C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAGASTGSAW--
AATGAACAATGGAATT
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Sox11/MA0869.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGASTGSAW-----
AACACTGAAATTGTT
 C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGASTGSAW
VRAACAATGG--
 A C G T A C G T C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGASTGSAW------
AACACTGCACATTGTT
 C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAGASTGSAW
----GTGGAT
 C G T A C G T A A C T G C T G A T A G C A C G T A C T G A T C G T C G A C G A T
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T