Information for 4-TTTCAGTGAC (Motif 6)

G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C
Reverse Opposite:
C A T G G A C T T G A C C T G A A G T C C G A T A T C G G C T A G C T A C G T A
p-value:1e-11
log p-value:-2.634e+01
Information Content per bp:1.586
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif2709.9
Percentage of Background Sequences with motif5.68%
Average Position of motif in Targets46.7 +/- 28.6bp
Average Position of motif in Background50.6 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGTGAC---
TAATTCAATGAAGTG
 A C G T A C G T G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C A C G T A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTGAC
ACTTTCACTTTC
 A C G T A C G T G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAGTGAC
TGGTTTCAGT---
 A C G T A C G T A C G T G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGTGAC
AGTTTCAGTTTC
 A C G T A C G T G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTGAC
ASTTTCASTTYC
 A C G T A C G T G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTGAC
ASTTTCACTTCC
 A C G T A C G T G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTCAGTGAC---
-BTGABTGACAGS
 G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTCAGTGAC---
-NTGATTGACAGN
 G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C A C G T A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGTGAC
AGTTTCAKTTTC
 A C G T A C G T G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGTGAC
ACTTTCACTTTC
 A C G T A C G T G C A T C G A T C G A T T A G C G C T A T C A G G A C T A C T G C T G A G T A C
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C