Information for 7-TTAGAAACTTGAT (Motif 5)

A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T
Reverse Opposite:
C G T A A G C T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A G T C A C G T C G T A G T C A
p-value:1e-11
log p-value:-2.682e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 24.0bp
Average Position of motif in Background46.9 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TTAGAAACTTGAT--
---GWAAYHTGABMC
 A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T A C G T A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TTAGAAACTTGAT--
---GWAAYHTGAKMC
 A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TTAGAAACTTGAT
TATCATTAGAACGCT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTAGAAACTTGAT
TTTGAAACCG---
 A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTAGAAACTTGAT
----AAGCTTG--
 A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTAGAAACTTGAT
GGTTAGAGACCT---
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TTAGAAACTTGAT
CCGTATTATAAACAA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTAGAAACTTGAT
CGTATCGAAACCAAA-
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTAGAAACTTGAT----
ATAACCACTTGAAAATT
 A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T A C G T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

Hes2/MA0616.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTAGAAACTTGAT
TAACGACACGTGC-
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C T G C T G A C G A T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T