Information for 4-CACCKCCAGGCCWSTC (Motif 4)

A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C
Reverse Opposite:
A C T G C G T A A T C G C G T A A T C G A T C G T A G C T A G C C G A T A C T G A C T G G T C A C T A G C T A G A C G T A T C G
p-value:1e-12
log p-value:-2.826e+01
Information Content per bp:1.701
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.6 +/- 15.4bp
Average Position of motif in Background47.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CACCKCCAGGCCWSTC
TACGCCCCGCCACTCTG---
 A C G T A C G T A C G T A C G T A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CACCKCCAGGCCWSTC
-----CTAGGCCT---
 A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CACCKCCAGGCCWSTC
-----CNAGGCCT---
 A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CACCKCCAGGCCWSTC
CCCCCCCCAC-------
 A C G T A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CACCKCCAGGCCWSTC---
--------AGCCACTCAAG
 A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.49
Offset:8
Orientation:forward strand
Alignment:CACCKCCAGGCCWSTC--
--------AASCACTCAA
 A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CACCKCCAGGCCWSTC
SNGCACCTGCHS-------
 A C G T A C G T A C G T A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CACCKCCAGGCCWSTC
CACTTCCTGT------
 A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C
A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.47
Offset:9
Orientation:reverse strand
Alignment:CACCKCCAGGCCWSTC---
---------NSCACTYVAV
 A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:CACCKCCAGGCCWSTC
-NNGGCCACGCCTTTN
 A T G C T G C A A G T C G A T C C A G T T G A C A G T C C G T A A T C G A T C G T A G C A T G C G C A T T A G C A C G T A G T C
A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G