Information for 6-CAGGCTTTGT (Motif 14)

A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T
Reverse Opposite:
C G T A T G A C G T C A C T G A C T G A C T A G A G T C G T A C A C G T A C T G
p-value:1e-8
log p-value:-1.927e+01
Information Content per bp:1.833
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif269.0
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets45.5 +/- 24.2bp
Average Position of motif in Background48.4 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAGGCTTTGT
----CTTTGT
 A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CAGGCTTTGT---
---CCWTTGTYYB
 A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAGGCTTTGT
CAAGCTT---
 A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAGGCTTTGT---
---YCTTTGTTCC
 A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CAGGCTTTGT---
---CCTTTGTTTT
 A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGGCTTTGT
-AGGCCTNG-
 A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTTTGT---------
YCAGGCWCAGTACCAGGCTC
 A C G T A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGGCTTTGT
AGGVNCCTTTGT
 A C G T A C G T A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAGGCTTTGT-
---CCWTTGTY
 A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGGCTTTGT
-AGGCCTAG-
 A G T C G T C A A C T G T C A G A G T C A G C T A G C T C A G T A C T G C G A T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T