Information for 5-GCCCCACCTGAGAAGC (Motif 10)

C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
Reverse Opposite:
A C T G G T A C A G C T A C G T A G T C A G C T A T G C C G T A A C T G A T C G A C G T C T A G A C T G A C T G C T A G G A T C
p-value:1e-10
log p-value:-2.375e+01
Information Content per bp:1.679
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif70.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets45.5 +/- 27.1bp
Average Position of motif in Background49.3 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCCCACCTGAGAAGC
GGCCYCCTGCTGDGH---
 A C G T A C G T C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCCCACCTGAGAAGC
-CCTCACCTG------
 C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCCCACCTGAGAAGC
CCCCCTGCTGTG----
 C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCCCACCTGAGAAGC
---CCTGCTGAGH---
 C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCCCACCTGAGAAGC
TNTCCTGCTGTGNNG-
 C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCCCACCTGAGAAGC
--NNCACCTGNN----
 C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCCCCACCTGAGAAGC
TCNCCTGCTGNGNNN-
 C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCCCCACCTGAGAAGC
-CGCCCCCTGACA---
 C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCCCACCTGAGAAGC
GACCCCCCGCTGCGC---
 A C G T A C G T C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:GCCCCACCTGAGAAGC
----------NGAAGC
 C T A G A G T C A G T C G T A C A G T C C G T A T A G C A G T C A C G T A T C G T C G A T C A G C G T A T C G A A C T G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C